Peptide LexiconAll compounds

Hirudin: The Leech Anticoagulant Protein and the Drug Made From It

Hirudin is a 65-amino-acid protein from the medicinal leech that blocks thrombin. What UniProt records about its structure, what the recombinant drug desirudin was, and how little current human evidence is in the registers.

Natural protein65 amino acids — over the 40-residue lineFormer medicine, not currently listed

Caroline S · Published 2026-11-09

Length

65 amino acids (UniProt P01050, hirudin variant-1, from Hirudo medicinalis). Above the 40-residue line US regulation uses for proteins (21 CFR 600.3).

Sequence

65 residues, three disulfide bonds (cysteines 6–14, 16–28 and 22–39) per UniProt P01050

Origin

Secreted by the salivary glands of the medicinal leech, which uses it to stop blood clotting while it feeds.

Last reviewed

2026-11-09

What is it good for?

Hirudin is a direct thrombin inhibitor: it binds the clotting enzyme thrombin and stops it turning fibrinogen into fibrin. The recombinant drug desirudin was developed for blood-clot prevention. It is not a treatment for a person to try, and this entry does not describe any use as advice. The current record contains no active label for it.

Illustration: A deep green glass test tube with a white cap on a white surface, with faint copper reflections.
Illustration

What it is

Hirudin is a protein secreted by the salivary glands of the medicinal leech, Hirudo medicinalis. UniProt's entry for the main variant, hirudin variant-1 (P01050), records a chain of 65 amino acids held in shape by three disulfide bonds. That size puts it above the 40-residue line used in US regulation, so the protein category is the accurate one (see peptide vs protein), whatever the wider market calls it.

What it does

Hirudin is a direct thrombin inhibitor. Thrombin is the enzyme that converts fibrinogen into fibrin, the mesh that holds a clot together. Hirudin binds thrombin directly, so it does not depend on antithrombin, the route used by heparin. That mechanism is the reason the leech's secretion made it into medicine, and it is the basis for the drugs derived from it, such as bivalirudin.

The drug: desirudin

Desirudin is the recombinant form of hirudin, produced outside the leech. It was developed as an injected anticoagulant, with published randomised trials looking at the prevention of venous thromboembolism in surgical patients. A PubMed search for desirudin together with randomised or trial terms returned 61 records on 2026-11-09. The individual trials were not opened for this entry, so this page reports only the count, not their results.

The current status is the important fact for a reader. A search of the DailyMed label index on 2026-11-09 returned no desirudin label. The page treats desirudin as a former medicine on that basis. The approval history was not re-verified in this run, and a reader should check the regulator's own record before relying on any date.

What the evidence does and does not show

  • Structure and mechanism: well characterised in the protein record. Well established.
  • Clot prevention after surgery: supported by published randomised trials of the recombinant drug. Those trials sit inside hospital care and were not about wellness.
  • Use outside a clinical setting: nothing in the published literature or the label index supports it. This entry does not suggest any.

Anticoagulants carry bleeding risk. A person who takes one, or who is considering one, needs a prescriber, not a reference page.

Where it stands

Question Answer as of 2026-11-09
Natural protein Yes, 65 amino acids (UniProt P01050)
Recombinant drug Desirudin, studied in randomised trials
Current US label None found in the DailyMed index queried
Advice None given here

Related entries on this library cover the other clotting-enzyme-targeting molecules and the protein-size question. Anyone reading about anticoagulants should also read the regulator's current guidance on bleeding risk, not a compound library.

What the research shows

Direct thrombin inhibition

Protein structure and function as annotated in UniProt P01050; a textbook mechanism, not re-tested in this run

Prevention of venous thromboembolism in surgical patients

Randomised trials of desirudin: PubMed returns 61 records matching desirudin with randomised or trial terms (counted 2026-11-09; individual trials not opened for this entry)

Use as a current medicine

DailyMed index queried 2026-11-09 for desirudin returned no current label

Bars show how much of the evidence is in humans, not how well anything works.

Where it stands

In the body

Not a human protein. A leech protein whose structure is well characterised.

As a medicine

Recombinant desirudin was developed as an injected anticoagulant; no current US label was found in the DailyMed index on 2026-11-09.

Published record

PubMed: 61 records matching desirudin with randomised or trial terms (2026-11-09).

Frequently asked questions

What is hirudin?

Hirudin is a protein of 65 amino acids that the medicinal leech produces to keep blood from clotting while it feeds. It is the best-known natural direct thrombin inhibitor.

Is hirudin a peptide?

It is a protein by the usual size line, at 65 amino acids. Many people call it a peptide, which the size rule does not support.

What is desirudin?

Desirudin is a recombinant form of hirudin made for medical use. It was an injected anticoagulant. No current US label was found on DailyMed when this entry was checked on 2026-11-09.

Is there human evidence for hirudin?

There are randomised trials of desirudin in the published literature; PubMed matched 61 trial-tagged records on 2026-11-09. Those trials are about clot prevention in patients who are already in hospital, not about any wellness use.