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Micafungin: A Ring of Six Amino Acids With a Fatty Tail, Used Against Candida — What It Is and What Its Label Shows

Micafungin is an antifungal medicine whose core is a ring of six amino acids — a cyclic lipopeptide of the echinocandin class. It blocks the making of a sugar polymer the fungal cell wall needs and human cells do not have. It is approved by intravenous infusion for Candida bloodstream and oesophageal infections and for prevention in stem-cell transplant patients.

FDA-approved (since 2005)Antifungal (echinocandin)Intravenous infusion only

Caroline S · Published 2026-10-06

Length

A cyclic hexapeptide — six amino acids closed into a ring — carrying a fatty side chain (ChEBI, via PubChem CID 477468); micafungin sodium is C56H70N9NaO23S, molecular weight 1,292.26 (label)

Sequence

Not a simple linear sequence: the ring is built largely from modified amino acids (the label's chemical name includes a dihydroxy-ornithine and a substituted hydroxy-threonine), and the label's chemical name starts from pneumocandin A0

Origin

Semisynthetic: made by chemically modifying a fermentation product of the fungus Coleophoma empetri F-11899 (label). First US approval 2005-03-16, Mycamine (Astellas, NDA 021506)

Last reviewed

2026-10-06

What is it good for?

Treating Candida infections — bloodstream infection (candidemia), disseminated infection, peritonitis and abscesses, and infection of the oesophagus — and preventing Candida infection in people undergoing haematopoietic stem-cell transplantation (label). It is a hospital antifungal given by intravenous infusion.

Illustration: A molecular model of micafungin with a ring and a fatty tail in white and deep green.
Illustration

What it is

Micafungin is an antifungal whose core is a ring of six amino acids carrying a fatty tail. ChEBI, as shown on PubChem (CID 477468), calls it "a cyclic hexapeptide echinocandin antibiotic"; the US label calls it "a semisynthetic lipopeptide (echinocandin)". Both describe the same thing: a small peptide ring, closed on itself, with a long fat-loving side chain attached.

It is not a peptide in the everyday sense of a hormone or a supplement. Most of the ring's building blocks are modified amino acids — the label's chemical name includes a dihydroxy-ornithine and a substituted hydroxy-threonine — and the molecule is made by chemistry on a natural product, not by stringing standard amino acids together.

The label gives its source and formula: it is made by chemically modifying a fermentation product of the fungus Coleophoma empetri F-11899, and micafungin sodium is C56H70N9NaO23S, molecular weight 1,292.26.

How it works

The label's mechanism is one sentence long: micafungin inhibits the synthesis of 1,3-beta-D-glucan, "an essential component of fungal cell walls, which is not present in mammalian cells." That selectivity — a target the fungus has and human cells do not — is what the label's wording emphasises.

The label also records resistance: clinical failures linked to mutations in the FKS component of the glucan-synthase enzyme.

What the label's trials show

Use (label) Trial design Result
Candidemia and invasive candidiasis Randomised, double-blind, vs caspofungin (70 mg then 50 mg/day) Success at end of IV therapy 135/191 (70.7%) on micafungin 100 mg/day vs 119/188 (63.3%); difference 7.4, 95% CI −2.0 to 16.3
Oesophageal candidiasis Two controlled trials, 763 patients, vs fluconazole Endoscopic, clinical and mycological outcomes described as comparable
Prevention after stem-cell transplant Randomised, double-blind, 882 patients, vs fluconazole 400 mg/day Success 343/425 (80.7%) on micafungin 50 mg/day vs 337/457 (73.7%); +7.0, 95% CI 1.5 to 12.5. Proven breakthrough Candida infections: 4 vs 2

Two notes the label itself makes. In the candidemia trial the confidence interval crosses zero, so the trial supports similar performance rather than superiority. And in the transplant trial the label states that efficacy against fungi other than Candida has not been established.

Doses on the label

Reported from the label, for reference; the dose for any patient is set by the treating team.

Indication Adults (label)
Candidemia, disseminated candidiasis, peritonitis, abscesses 100 mg once daily
Oesophageal candidiasis 150 mg once daily
Prevention in stem-cell transplant recipients 50 mg once daily

Children's doses are weight-based, and infants under 4 months have a separate dose for one indication. Every dose is an intravenous infusion over one hour. Across the label's pharmacokinetic table, the half-life in adults runs from about 13 to 17 hours.

Safety

The label's warnings cover anaphylaxis, haemolysis (including acute intravascular haemolysis in a healthy volunteer), liver test abnormalities with isolated cases of hepatitis and liver failure, kidney effects and infusion reactions.

One finding comes from animals and is labelled as such: in rats given 32 mg/kg/day for 3 to 6 months — about 8 times the highest human dose by exposure — liver adenomas and carcinomas appeared after long recovery periods of up to 18–21 months (label, section 13.1). That is a rat result; the label does not report it in people.

Where it stands

  • Approved in the US since 2005-03-16 (Mycamine, Astellas, NDA 021506, a new molecular entity).
  • Brand: those Mycamine vials are listed as discontinued, with a Federal Register determination that this was not for safety or effectiveness reasons. A second 2005 Mycamine record (NDA 021754) still shows prescription status in the database.
  • Generics: 11 generic applications and Baxter's ready-mixed infusion bag (NDA 216142, 2023-09-29) are listed as prescription products; three other applications are discontinued (Drugs@FDA, 2026-10-06).
  • Research record: PubMed indexes 2,382 records, 44 tagged as randomised trials (2026-10-06).

Micafungin's wall-building target is a sugar polymer; the bacterial equivalent, a sugar mesh cross-linked by short peptides, is explained in the peptidoglycan entry. The body's own antimicrobial peptide is described in the LL-37 entry, and other approved peptide drugs in the library include linaclotide and ziconotide.

What the research shows

Treats candidemia and invasive candidiasis

FDA-approved indication; randomised double-blind trial against caspofungin, 70.7% vs 63.3% treatment success at the end of IV therapy (label, Study 03-0-192)

Prevents Candida infection after stem-cell transplant

FDA-approved indication; randomised double-blind trial in 882 patients against fluconazole, 80.7% vs 73.7% success (label)

Treats oesophageal candidiasis

FDA-approved indication; two controlled trials in 763 patients against fluconazole, outcomes described as comparable (label)

Bars show how much of the evidence is in humans, not how well anything works.

Where it stands

United States

Approved since 2005-03-16. The Mycamine vials under Astellas' NDA 021506 are listed as discontinued, with a Federal Register determination that this was not for safety or effectiveness reasons; 11 generic applications and a ready-mixed bag (Baxter, NDA 216142, 2023) are listed as prescription products (Drugs@FDA, 2026-10-06).

How it is given

Intravenous infusion over one hour, once daily (label).

Published record

PubMed: 2,382 records for micafungin, 44 tagged as randomised controlled trials (2026-10-06).

Frequently asked questions

Is micafungin a peptide?

Yes, at its core. ChEBI describes it as a cyclic hexapeptide — six amino acids joined into a ring — and the label calls it a lipopeptide because a fatty side chain is attached. Most of its amino acids are modified forms not found in ordinary proteins.

What is micafungin used for?

The label lists Candida bloodstream infection and other invasive Candida infections, Candida infection of the oesophagus, and prevention of Candida infection in people having a haematopoietic stem-cell transplant. It is given in hospital by intravenous infusion.

How does micafungin work?

It blocks an enzyme that builds 1,3-beta-D-glucan, a sugar polymer in the fungal cell wall. The label notes that this polymer is not present in mammalian cells, which is why the target is specific to the fungus.

What is an echinocandin?

The class of antifungals micafungin belongs to, named in its label. ChEBI describes micafungin as a cyclic hexapeptide echinocandin; its label's main candidemia trial compared it with caspofungin, another antifungal.

What are micafungin's main warnings?

The label lists serious allergic reactions including anaphylaxis, breakdown of red blood cells (haemolysis), liver test abnormalities with isolated cases of hepatitis and liver failure, kidney effects, and infusion-site reactions. Monitoring is the responsibility of the treating team.

Is Mycamine still sold?

Drugs@FDA lists the Mycamine vials under Astellas' application as discontinued, with a Federal Register determination that the withdrawal was not for safety or effectiveness reasons. Generic micafungin from several manufacturers is listed as a prescription product.